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R wrappers to connect Python dimensional reduction tools and single cell data objects (Seurat, SingleCellExperiment, etc...)

scGEAToolbox: Matlab toolbox for single-cell gene expression analyses

workflow matlab scrna-seq analyses single-cell rna-seq-analysis tsne matlab-toolbox trajectory dimensionality phate demo-scripts

A study of non-linear manifold feature extraction in spike sorting: a comprehensive benchmark of 15 feature extraction methods

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